Package: linelistBayes
Type: Package
Title: Bayesian Analysis of Epidemic Data Using Line List and Case
        Count Approaches
Version: 1.0
Date: 2024-04-30
Authors@R: 
    c(person("Chad", "Milando", , "cmilando@bu.edu", role = c("aut", "cre")),
      person(given = "Tenglong", family = "Li", role = "ctb"),
      person(given = "Laura", family = "White", role = "ctb"))
Maintainer: Chad Milando <cmilando@bu.edu>
Description: Provides tools for performing Bayesian inference on
        epidemiological data to estimate the time-varying reproductive
        number and other related metrics. These methods were published
        in Li and White (2021) <doi:10.1371/journal.pcbi.1009210>. This
        package supports analyses based on aggregated case count data
        and individual line list data, facilitating enhanced
        surveillance and intervention planning for infectious diseases
        like COVID-19.
License: GPL-3
Imports: Rcpp (>= 1.0.11), magrittr, lubridate, coda, dplyr
LinkingTo: Rcpp, RcppArmadillo
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)
VignetteBuilder: knitr
LazyData: true
Depends: R (>= 2.10)
Config/testthat/edition: 3
RoxygenNote: 7.3.1
Encoding: UTF-8
Repository: https://cmilando.r-universe.dev
Date/Publication: 2024-05-02 20:34:38 UTC
RemoteUrl: https://github.com/cmilando/linelistbayes
RemoteRef: HEAD
RemoteSha: 85ac016db4685442c2896f9b1561679efdf63fc5
NeedsCompilation: yes
Packaged: 2026-07-03 18:02:03 UTC; root
Author: Chad Milando [aut, cre],
  Tenglong Li [ctb],
  Laura White [ctb]